Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC8621 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296697 bp
Thymine Count
1303842 bp
Guanine Count
1332519 bp
Cytosine Count
1318136 bp
Genome Length
5251194 bp
Protein-coding Genes
4468 genes
Non-Coding Genes
800 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| datp pyrophosphohydrolase | NCTC8621_02260 | Not Available | Positive | 2202603 - 2203046 | 16947.2 |
| yebc/pmpr family dna-binding regulatory protein | NCTC8621_02261 | Not Available | Positive | 2203075 - 2203815 | 26438.1 |
| holliday junction resolvase | NCTC8621_02262 | Not Available | Positive | 2203850 - 2204371 | 18747.9 |
| protein | NCTC8621_02263 | Not Available | Negative | 2204373 - 2204576 | 7600.12 |
| protein | NCTC8621_02264 | Not Available | Negative | 2204736 - 2204975 | 8706.4 |
| holliday junction atp-dependent dna helicase | NCTC8621_02265 | Not Available | Positive | 2205249 - 2205860 | 22087.0 |
| holliday junction atp-dependent dna helicase | NCTC8621_02266 | Not Available | Positive | 2205869 - 2206879 | 37176.0 |
| high-affinity zinc uptake system membrane protein | NCTC8621_02267 | Not Available | Negative | 2207024 - 2207809 | 27778.5 |
| high-affinity zinc transporter atpase | NCTC8621_02268 | Not Available | Negative | 2207806 - 2208258 | 16839.6 |
| high-affinity zinc transporter atpase | NCTC8621_02269 | Not Available | Negative | 2208269 - 2208562 | 10633.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





