Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC8621 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296697 bp
Thymine Count
1303842 bp
Guanine Count
1332519 bp
Cytosine Count
1318136 bp
Genome Length
5251194 bp
Protein-coding Genes
4468 genes
Non-Coding Genes
800 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative cobalamin biosynthesis protein cbig | NCTC8621_02079 | Not Available | Positive | 2046378 - 2046815 | 15701.8 |
| bifunctional adenosylcobalamin biosynthesis protein | NCTC8621_02080 | Not Available | Positive | 2046949 - 2047494 | 20137.1 |
| cobalamin synthase | NCTC8621_02081 | Not Available | Positive | 2047491 - 2048234 | 26337.3 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | NCTC8621_02082 | Not Available | Positive | 2048246 - 2049325 | 36929.3 |
| erfk/ybis/ycfs/ynhg family protein | NCTC8621_02083 | Not Available | Positive | 2049387 - 2050322 | 34479.3 |
| Trna-asn | Not Available | Not Available | Positive | 2050378 - 2050453 | Not Available |
| nitrogen assimilation regulatory protein nac | NCTC8621_02085 | Not Available | Positive | 2050780 - 2051697 | 32860.0 |
| lysr family transcriptional regulator | NCTC8621_02086 | Not Available | Positive | 2051799 - 2052749 | 35858.1 |
| Trna-asn | Not Available | Not Available | Positive | 2052787 - 2052862 | Not Available |
| multidrug efflux system | NCTC8621_02088 | Not Available | Positive | 2053056 - 2054510 | 52808.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





