Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC8621 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296697 bp
Thymine Count
1303842 bp
Guanine Count
1332519 bp
Cytosine Count
1318136 bp
Genome Length
5251194 bp
Protein-coding Genes
4468 genes
Non-Coding Genes
800 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| indigoidine synthase a like protein | NCTC8621_01806 | Not Available | Positive | 1790222 - 1791160 | 32895.8 |
| putative nucleoside transporter | NCTC8621_01807 | Not Available | Positive | 1791254 - 1792504 | 43399.3 |
| dna-binding transcriptional activator yeil | NCTC8621_01808 | Not Available | Negative | 1792571 - 1793269 | 26867.6 |
| pyrimidine-specific ribonucleoside hydrolase (cytidine/uridine-specific hydrolase) | NCTC8621_01809 | Not Available | Positive | 1793399 - 1794340 | 33777.1 |
| putative nucleoside transporter | NCTC8621_01810 | Not Available | Positive | 1794444 - 1795214 | 26180.1 |
| putative pyrimidine kinase | NCTC8621_01811 | Not Available | Negative | 1795270 - 1796358 | 39676.6 |
| endonuclease iv | NCTC8621_01812 | Not Available | Negative | 1796361 - 1797218 | 31483.2 |
| inner membrane protein | NCTC8621_01813 | Not Available | Negative | 1797292 - 1798341 | 36884.3 |
| lysr family transcriptional regulator | NCTC8621_01814 | Not Available | Positive | 1798440 - 1799321 | 32753.8 |
| lysine transporter | NCTC8621_01815 | Not Available | Positive | 1799526 - 1800995 | 53565.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





