Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC8621 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296697 bp
Thymine Count
1303842 bp
Guanine Count
1332519 bp
Cytosine Count
1318136 bp
Genome Length
5251194 bp
Protein-coding Genes
4468 genes
Non-Coding Genes
800 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative aldose 1-epimerase | NCTC8621_01392 | Not Available | Positive | 1360129 - 1361001 | 32577.2 |
| inner membrane protein | NCTC8621_01393 | Not Available | Negative | 1361161 - 1361583 | 15242.4 |
| putative 3-phenylpropionate permease | NCTC8621_01394 | Not Available | Positive | 1361952 - 1363091 | 41553.1 |
| stationary phase inducible protein csie | NCTC8621_01395 | Not Available | Negative | 1363083 - 1364363 | 49031.3 |
| peptidase | NCTC8621_01396 | Not Available | Negative | 1364554 - 1365408 | 31505.6 |
| inositol-1-monophosphatase | NCTC8621_01397 | Not Available | Negative | 1365553 - 1366356 | 29173.8 |
| putative rna methyltransferase | NCTC8621_01398 | Not Available | Positive | 1366475 - 1367215 | 27049.6 |
| fes cluster assembly transcription factor iscr | NCTC8621_01399 | Not Available | Positive | 1367485 - 1367973 | 17337.6 |
| cysteine desulfurase | NCTC8621_01401 | Not Available | Positive | 1368085 - 1369299 | 45092.2 |
| nifu-like protein | NCTC8621_01402 | Not Available | Positive | 1369327 - 1369713 | 13849.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





