Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC8621 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296697 bp
Thymine Count
1303842 bp
Guanine Count
1332519 bp
Cytosine Count
1318136 bp
Genome Length
5251194 bp
Protein-coding Genes
4468 genes
Non-Coding Genes
800 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (adenine-n(6)-)-methyltransferase | NCTC8621_01359 | Not Available | Positive | 1322171 - 1322908 | 27315.5 |
| l-aspartate oxidase | NCTC8621_01360 | Not Available | Negative | 1322893 - 1324515 | 60188.7 |
| rna polymerase sigma factor rpoe | NCTC8621_01361 | Not Available | Positive | 1324923 - 1325498 | 21697.0 |
| sigma-e factor negative regulator | NCTC8621_01362 | Not Available | Positive | 1325531 - 1326181 | 24322.8 |
| sigma-e factor regulatory protein | NCTC8621_01363 | Not Available | Positive | 1326181 - 1327137 | 35751.8 |
| sigma-e factor regulatory protein | NCTC8621_01364 | Not Available | Positive | 1327134 - 1327613 | 16688.4 |
| gtp-binding protein lepa | NCTC8621_01365 | Not Available | Positive | 1327811 - 1329610 | 66574.1 |
| signal peptidase i | NCTC8621_01366 | Not Available | Positive | 1329626 - 1330600 | 35948.3 |
| gtp-binding protein era | NCTC8621_01368 | Not Available | Positive | 1331544 - 1332449 | 33798.1 |
| dna repair protein | NCTC8621_01369 | Not Available | Positive | 1332461 - 1333189 | 27364.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





