Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC8621 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296697 bp
Thymine Count
1303842 bp
Guanine Count
1332519 bp
Cytosine Count
1318136 bp
Genome Length
5251194 bp
Protein-coding Genes
4468 genes
Non-Coding Genes
800 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein assembly complex subunit yfio | NCTC8621_01335 | Not Available | Negative | 1295421 - 1296158 | 27830.9 |
| 23s rrna pseudouridine synthase | NCTC8621_01336 | Not Available | Positive | 1296293 - 1297273 | 37139.8 |
| putative inner membrane protein | NCTC8621_01337 | Not Available | Positive | 1297270 - 1298001 | 26354.4 |
| protein disaggregation chaperone | NCTC8621_01338 | Not Available | Positive | 1298131 - 1300704 | 95590.8 |
| Trna-glu | Not Available | Not Available | Positive | 1302773 - 1302848 | Not Available |
| uncharacterised protein | NCTC8621_01344 | Not Available | Positive | 1306349 - 1306819 | 17389.2 |
| putative transposase, is110 family | NCTC8621_01345 | Not Available | Negative | 1306864 - 1307481 | 23656.2 |
| transposase insg | NCTC8621_01346 | Not Available | Positive | 1307572 - 1308900 | 50387.9 |
| alpha-ketoglutarate transporter | NCTC8621_01347 | Not Available | Positive | 1309364 - 1310662 | 47083.3 |
| lipoprotein | NCTC8621_01348 | Not Available | Negative | 1310659 - 1310931 | 9959.45 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





