Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC8621 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296697 bp
Thymine Count
1303842 bp
Guanine Count
1332519 bp
Cytosine Count
1318136 bp
Genome Length
5251194 bp
Protein-coding Genes
4468 genes
Non-Coding Genes
800 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase isoenzymes formation protein | NCTC8621_01107 | Not Available | Negative | 1112066 - 1113187 | 41353.6 |
| hydrogenase isoenzymes formation protein | NCTC8621_01108 | Not Available | Negative | 1113187 - 1113459 | 9732.58 |
| hydrogenase isoenzymes nickel incorporation protein | NCTC8621_01109 | Not Available | Negative | 1113450 - 1114322 | 31596.9 |
| hydrogenase nickel incorporation protein | NCTC8621_01110 | Not Available | Negative | 1114326 - 1114676 | 13168.9 |
| formate hydrogenlyase regulatory protein | NCTC8621_01111 | Not Available | Positive | 1114888 - 1115349 | 17627.9 |
| formate hydrogenlyase subunit 2 | NCTC8621_01112 | Not Available | Positive | 1115474 - 1116085 | 21876.4 |
| formate hydrogenlyase subunit 3 | NCTC8621_01113 | Not Available | Positive | 1116082 - 1117908 | 64177.2 |
| formate hydrogenlyase subunit 4 | NCTC8621_01114 | Not Available | Positive | 1117911 - 1118834 | 33031.4 |
| formate hydrogenlyase subunit e | NCTC8621_01115 | Not Available | Positive | 1118852 - 1120561 | 64970.1 |
| formate hydrogenlyase subunit 6 | NCTC8621_01116 | Not Available | Positive | 1120571 - 1121113 | 20327.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





