Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC8621 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296697 bp
Thymine Count
1303842 bp
Guanine Count
1332519 bp
Cytosine Count
1318136 bp
Genome Length
5251194 bp
Protein-coding Genes
4468 genes
Non-Coding Genes
800 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein-l-isoaspartate o-methyltransferase | NCTC8621_01087 | Not Available | Positive | 1092450 - 1093076 | 23259.2 |
| lipoprotein nlpd | NCTC8621_01088 | Not Available | Positive | 1093216 - 1094355 | 40181.3 |
| rna polymerase sigma factor rpos | NCTC8621_01089 | Not Available | Positive | 1094418 - 1095410 | 37975.1 |
| regulator | NCTC8621_01090 | Not Available | Negative | 1095531 - 1095938 | 15497.9 |
| 4-hydroxybenzoate decarboxylase subunit b | NCTC8621_01091 | Not Available | Positive | 1096085 - 1096678 | 21432.1 |
| 4-hydroxybenzoate decarboxylase subunit c | NCTC8621_01092 | Not Available | Positive | 1096678 - 1097835 | 42711.9 |
| 4-hydroxybenzoate decarboxylase subunit c | NCTC8621_01093 | Not Available | Positive | 1097783 - 1098106 | 11540.0 |
| 4-hydroxybenzoate decarboxylase subunit d | NCTC8621_01094 | Not Available | Positive | 1098117 - 1098353 | 9180.06 |
| inner membrane permease ygbn | NCTC8621_01095 | Not Available | Negative | 1098392 - 1099756 | 46802.7 |
| hydroxypyruvate isomerase | NCTC8621_01096 | Not Available | Negative | 1099845 - 1100621 | 29223.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





