Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC8621 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296697 bp
Thymine Count
1303842 bp
Guanine Count
1332519 bp
Cytosine Count
1318136 bp
Genome Length
5251194 bp
Protein-coding Genes
4468 genes
Non-Coding Genes
800 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| propionate kinase/acetate kinase c, anaerobic | NCTC8621_00696 | Not Available | Positive | 677890 - 679098 | 43437.7 |
| keto-acid formate acetyltransferase | NCTC8621_00697 | Not Available | Positive | 679132 - 681426 | 85990.5 |
| tdcf protein | NCTC8621_00698 | Not Available | Positive | 681440 - 681829 | 14008.0 |
| l-serine dehydratase | NCTC8621_00699 | Not Available | Positive | 681901 - 683265 | 48560.6 |
| transporter | NCTC8621_00700 | Not Available | Positive | 683543 - 684874 | 48331.6 |
| putative inner membrane protein | NCTC8621_00701 | Not Available | Positive | 684902 - 686212 | 45306.7 |
| protein | NCTC8621_00702 | Not Available | Negative | 686344 - 686508 | 5935.07 |
| pirin-related protein | NCTC8621_00703 | Not Available | Negative | 686531 - 687232 | 25901.0 |
| lysr family transcriptional regulator | NCTC8621_00704 | Not Available | Positive | 687337 - 688233 | 33231.3 |
| inner membrane protein yhah | NCTC8621_00705 | Not Available | Negative | 688267 - 688635 | 14441.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





