Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC9007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1337842 bp
Thymine Count
1331472 bp
Guanine Count
1322272 bp
Cytosine Count
1402761 bp
Genome Length
5394347 bp
Protein-coding Genes
4534 genes
Non-Coding Genes
702 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail protein | NCTC9007_03752 | Not Available | Negative | 3736053 - 3737132 | 39223.1 |
| Tail/dna circulation protein | NCTC9007_03753 | Not Available | Negative | 3737129 - 3738457 | 47834.6 |
| Tail protein | NCTC9007_03754 | Not Available | Negative | 3738518 - 3739423 | 32438.0 |
| Attl | Not Available | Not Available | Positive | 4081549 - 4081561 | Not Available |
| Prophage p4 integrase | NCTC9007_04113 | Not Available | Positive | 4095020 - 4096285 | 47977.0 |
| shia-like protein | NCTC9007_04114 | Not Available | Positive | 4096541 - 4097584 | 40217.8 |
| Transposase is1 | NCTC9007_04115 | Not Available | Positive | 4098114 - 4098389 | 9868.96 |
| Transposase is1 | NCTC9007_04116 | Not Available | Positive | 4098434 - 4098811 | 14887.3 |
| papx protein | NCTC9007_04117 | Not Available | Negative | 4099277 - 4099777 | 19500.4 |
| Gene 56 protein | NCTC9007_04118 | Not Available | Negative | 4100843 - 4101094 | 9743.03 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





