Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC9007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1337842 bp
Thymine Count
1331472 bp
Guanine Count
1322272 bp
Cytosine Count
1402761 bp
Genome Length
5394347 bp
Protein-coding Genes
4534 genes
Non-Coding Genes
702 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | NCTC9007_01464 | Not Available | Positive | 1463444 - 1464100 | 24802.0 |
| uncharacterised protein | NCTC9007_01465 | Not Available | Positive | 1464100 - 1464318 | 8118.19 |
| Integrase | NCTC9007_01466 | Not Available | Negative | 1464276 - 1465511 | 46750.1 |
| Attr | Not Available | Not Available | Positive | 1468803 - 1468815 | Not Available |
| Attl | Not Available | Not Available | Positive | 1556199 - 1556218 | Not Available |
| Putative damage-inducible protein dini | NCTC9007_01553 | Not Available | Positive | 1556497 - 1556598 | 3872.65 |
| rhodococcus equi virulence-associated protein | NCTC9007_01554 | Not Available | Negative | 1556774 - 1557226 | 15952.8 |
| Hypothetical protein | NCTC9007_01555 | Not Available | Negative | 1557862 - 1558158 | 10872.2 |
| Hypothetical protein | NCTC9007_01556 | Not Available | Negative | 1558168 - 1558446 | 10994.6 |
| Putative tail fiber protein | NCTC9007_01557 | Not Available | Negative | 1558443 - 1560506 | 73523.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





