Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC9007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1337842 bp
Thymine Count
1331472 bp
Guanine Count
1322272 bp
Cytosine Count
1402761 bp
Genome Length
5394347 bp
Protein-coding Genes
4534 genes
Non-Coding Genes
702 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative head morphogenesis protein | NCTC9007_01394 | Not Available | Negative | 1432186 - 1433133 | 36482.8 |
| Portal protein | NCTC9007_01395 | Not Available | Negative | 1433072 - 1434451 | 51807.6 |
| Hypothetical protein | NCTC9007_01396 | Not Available | Negative | 1434600 - 1436078 | 55213.0 |
| Putative terminase small subunit | NCTC9007_01397 | Not Available | Negative | 1436081 - 1436566 | 18458.2 |
| Hypothetical protein | NCTC9007_01398 | Not Available | Negative | 1436577 - 1436723 | 5746.74 |
| uncharacterised protein | NCTC9007_01399 | Not Available | Negative | 1437302 - 1437397 | 3318.34 |
| Hypothetical protein | NCTC9007_01400 | Not Available | Negative | 1437473 - 1438030 | 20500.6 |
| Lysis protein rz | NCTC9007_01401 | Not Available | Negative | 1438308 - 1438778 | 17153.7 |
| Phage lysozyme | NCTC9007_01402 | Not Available | Negative | 1438766 - 1439257 | 18181.0 |
| Holin protein | NCTC9007_01403 | Not Available | Negative | 1439258 - 1439458 | 7299.71 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





