Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC10418 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290533 bp
Thymine Count
1291698 bp
Guanine Count
1326079 bp
Cytosine Count
1318239 bp
Genome Length
5226549 bp
Protein-coding Genes
7091 genes
Non-Coding Genes
425 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | NCTC10418_03907 | Not Available | Positive | 2637368 - 2637667 | 10271.5 |
| abc transporter permease | NCTC10418_03908 | Not Available | Positive | 2637622 - 2637900 | 10328.7 |
| d-ala-d-ala transporter subunit ddpd | NCTC10418_03909 | Not Available | Positive | 2637959 - 2638891 | 34080.7 |
| putative d,d-dipeptide transport atp-binding protein ddpf | NCTC10418_03910 | Not Available | Positive | 2639124 - 2639864 | 27862.9 |
| peroxiredoxin (osmotically-inducible protein c) | NCTC10418_03911 | Not Available | Negative | 2639920 - 2640351 | 15089.0 |
| biofilm-dependent modulation protein | NCTC10418_03912 | Not Available | Positive | 2640697 - 2640912 | 7988.24 |
| 30s ribosomal subunit s22 | NCTC10418_03913 | Not Available | Positive | 2641014 - 2641151 | 5096.13 |
| malate dehydrogenase | NCTC10418_03914 | Not Available | Positive | 2641308 - 2643005 | 63183.0 |
| alcohol dehydrogenase | NCTC10418_03915 | Not Available | Positive | 2643139 - 2644149 | 35371.6 |
| dna-binding transcriptional regulator | NCTC10418_03916 | Not Available | Positive | 2644218 - 2644580 | 13385.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





