Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC10418 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290533 bp
Thymine Count
1291698 bp
Guanine Count
1326079 bp
Cytosine Count
1318239 bp
Genome Length
5226549 bp
Protein-coding Genes
7091 genes
Non-Coding Genes
425 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative lipoprotein | NCTC10418_03897 | Not Available | Positive | 2628294 - 2628524 | 8668.47 |
| putative lipoprotein | NCTC10418_03898 | Not Available | Positive | 2628514 - 2629449 | 35478.6 |
| putative signal transduction protein | NCTC10418_03899 | Not Available | Positive | 2629821 - 2630246 | 16347.0 |
| diguanylate cyclase | NCTC10418_03900 | Not Available | Positive | 2630263 - 2630952 | 26672.8 |
| diguanylate cyclase | NCTC10418_03901 | Not Available | Positive | 2630903 - 2631205 | 11099.3 |
| sensor kinase | NCTC10418_03902 | Not Available | Positive | 2631230 - 2631904 | 25722.9 |
| heme-regulated cyclic amp phosphodiesterase (direct oxygen sensor protein) | NCTC10418_03903 | Not Available | Positive | 2631885 - 2633519 | 61099.3 |
| d-alanyl-d-alanine dipeptidase | NCTC10418_03904 | Not Available | Positive | 2633889 - 2634470 | 21228.2 |
| abc transporter substrate-binding protein | NCTC10418_03905 | Not Available | Positive | 2634484 - 2635914 | 52879.4 |
| abc transporter permease | NCTC10418_03906 | Not Available | Positive | 2636037 - 2637140 | 40485.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





