Escherichia coli strain NCTC10082

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain NCTC10082 is a gram-negative, rod-shaped bacterium that exhibits mobility due to the presence of flagella. This strain is classified as a facultative anaerobe, allowing it to thrive in both aerobic and anaerobic environments, typically at an optimal temperature of 37°C, indicating its mesophilic nature. It is known to exist in pairs or as single cells and has two membranes surrounding its cellular structure. NCTC10082 is primarily associated with various hosts, including Homo sapiens, Gallus gallus, Bos taurus, and multiple other vertebrates and invertebrates. Its capability to inhabit diverse organisms highlights its ecological versatility. In terms of pathogenicity, this strain is notorious for causing a range of health issues, particularly in humans. It is implicated in urinary tract infections (UTIs), gastrointestinal infections, and severe conditions such as neonatal meningitis and hemolytic uremic syndrome (HUS). The strain's association with foodborne infections further underscores its potential impact on public health. Given its free-living biotic relationship and ability to infect multiple hosts, E. coli NCTC10082 serves as an important model for studying bacterial pathogenicity and host interactions. Its role in various diseases emphasizes the necessity for ongoing research into its mechanisms of infection and transmission, which are crucial for developing effective prevention and treatment strategies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain NCTC10082

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain NCTC10082
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain NCTC10082 genome assembly, contig:

Gene Summary

Adenine Count

1448990 bp

Thymine Count

1443867 bp

Guanine Count

1476778 bp

Cytosine Count

1468820 bp

Genome Length

5838455 bp

Protein-coding Genes

4808 genes

Non-Coding Genes

936 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Hypothetical proteinNCTC10082_00236Not AvailableNegative257046 - 25751017150.2
Hypothetical proteinNCTC10082_00237Not AvailableNegative257512 - 25796116908.9
Hypothetical proteinNCTC10082_00238Not AvailableNegative257963 - 2581517225.05
Hypothetical proteinNCTC10082_00239Not AvailableNegative258181 - 2583546740.61
Hypothetical proteinNCTC10082_00240Not AvailableNegative258450 - 25886315008.7
LygfNCTC10082_00241Not AvailableNegative258874 - 25928115627.0
Hypothetical proteinNCTC10082_00242Not AvailableNegative259297 - 26005828005.4
Dna replication proteinNCTC10082_00243Not AvailableNegative260081 - 26082728087.8
Trna-gly;Not AvailableNot AvailablePositive260250 - 260324Not Available
Hypothetical proteinNCTC10082_00244Not AvailableNegative260834 - 26196441667.6

Displaying genes 51 – 60 of 5744 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total