Chryseobacterium indoltheticum strain NCTC13560

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Weeksellaceae

Genus

Chryseobacterium

Description

Chryseobacterium indoltheticum strain NCTC13560 is a rod-shaped bacterium that has been isolated from diverse habitats, specifically dairy products and urban sewage sludge. This strain possesses a single replicon, which is characteristic of many bacteria that have streamlined genetic organization. C. indoltheticum is recognized for its potential health effects on humans, with documented associations with serious conditions such as bacteremia, pneumonia, meningitis, keratitis, and myositis. These health issues highlight the pathogenic potential of this species, particularly in immunocompromised individuals or those with underlying health conditions. The strain is cataloged with the accession number UFVS00000000.1, which provides a reference for researchers studying its genetic and phenotypic characteristics. The presence of C. indoltheticum in both dairy products and urban sewage sludge suggests its adaptability to various environments, as well as its potential for transmission through contaminated food sources or water. From a biological and ecological perspective, the ability of C. indoltheticum to thrive in urban sewage sludge indicates its role in the microbial community of waste management systems. Its presence in dairy products raises concerns regarding food safety and public health, emphasizing the need for monitoring and control measures in food production environments. Understanding the ecology of this strain is crucial for developing strategies to mitigate its adverse health effects while appreciating its role in natural and anthropogenic ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyWeeksellaceae
GenusChryseobacterium
SpeciesChryseobacterium indoltheticum
Strainstrain NCTC13560

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatdairy products; urban sewage sludge
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chryseobacterium indoltheticum strain NCTC13560 genome assembly,

Gene Summary

Adenine Count

1395174 bp

Thymine Count

1401437 bp

Guanine Count

730807 bp

Cytosine Count

728121 bp

Genome Length

4255539 bp

Protein-coding Genes

3883 genes

Non-Coding Genes

107 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nadp-dependent alcohol dehydrogenase c 2NCTC13560_03684Not AvailablePositive3909112 - 391016437879.4
phosphonoacetate hydrolaseNCTC13560_03685Not AvailableNegative3910369 - 391164648716.9
por secretion system c-terminal sorting domainNCTC13560_03686Not AvailableNegative3911855 - 391264027851.8
ribulose-5-phosphate 4-epimerase and related epimerases and aldolasesNCTC13560_03687Not AvailableNegative3912643 - 391317019270.3
uncharacterized conserved proteinNCTC13560_03688Not AvailableNegative3913170 - 391371220055.1
uncharacterised proteinNCTC13560_03689Not AvailableNegative3913723 - 391407312706.2
uncharacterised proteinNCTC13560_03690Not AvailableNegative3914076 - 391492131912.9
dna-binding transcriptional dual regulator crpNCTC13560_03691Not AvailableNegative3915050 - 391569424730.1
protein of uncharacterised function (duf3467)NCTC13560_03692Not AvailableNegative3915829 - 391613711332.5
dna-directed rna polymerase subunit beta'NCTC13560_03693Not AvailableNegative3916223 - 3920488158175.0

Displaying genes 3661 – 3670 of 3990 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
BacteremiaCausesPMC9652132
PneumoniaCausesPMC9652132
MeningitisCausesPMC9652132
MyositisCausesPMC9652132
KeratitisCausesPMC9652132

Displaying health effects 1 – 5 of 5 in total