Chryseobacterium indoltheticum strain NCTC13560

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Weeksellaceae

Genus

Chryseobacterium

Description

Chryseobacterium indoltheticum strain NCTC13560 is a rod-shaped bacterium that has been isolated from diverse habitats, specifically dairy products and urban sewage sludge. This strain possesses a single replicon, which is characteristic of many bacteria that have streamlined genetic organization. C. indoltheticum is recognized for its potential health effects on humans, with documented associations with serious conditions such as bacteremia, pneumonia, meningitis, keratitis, and myositis. These health issues highlight the pathogenic potential of this species, particularly in immunocompromised individuals or those with underlying health conditions. The strain is cataloged with the accession number UFVS00000000.1, which provides a reference for researchers studying its genetic and phenotypic characteristics. The presence of C. indoltheticum in both dairy products and urban sewage sludge suggests its adaptability to various environments, as well as its potential for transmission through contaminated food sources or water. From a biological and ecological perspective, the ability of C. indoltheticum to thrive in urban sewage sludge indicates its role in the microbial community of waste management systems. Its presence in dairy products raises concerns regarding food safety and public health, emphasizing the need for monitoring and control measures in food production environments. Understanding the ecology of this strain is crucial for developing strategies to mitigate its adverse health effects while appreciating its role in natural and anthropogenic ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyWeeksellaceae
GenusChryseobacterium
SpeciesChryseobacterium indoltheticum
Strainstrain NCTC13560

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatdairy products; urban sewage sludge
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chryseobacterium indoltheticum strain NCTC13560 genome assembly,

Gene Summary

Adenine Count

1395174 bp

Thymine Count

1401437 bp

Guanine Count

730807 bp

Cytosine Count

728121 bp

Genome Length

4255539 bp

Protein-coding Genes

3883 genes

Non-Coding Genes

107 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
uncharacterised proteinNCTC13560_02207Not AvailableNegative2341333 - 234215132663.7
predicted transcriptional regulatorNCTC13560_02208Not AvailablePositive2342486 - 234276710865.2
protein of uncharacterised function (duf3853)NCTC13560_02209Not AvailablePositive2342864 - 23431189334.64
uncharacterised proteinNCTC13560_02210Not AvailablePositive2343179 - 234383825738.2
uncharacterised proteinNCTC13560_02211Not AvailablePositive2343930 - 234503043479.6
dna primase (bacterial type)NCTC13560_02212Not AvailablePositive2345434 - 234627332440.7
copper-exporting p-type atpase aNCTC13560_02213Not AvailablePositive2346471 - 234892192092.3
uncharacterized protein, possibly involved in nitrogen fixationNCTC13560_02214Not AvailablePositive2348973 - 23491225680.04
uncharacterized protein conserved in bacteriaNCTC13560_02215Not AvailablePositive2349259 - 234971117292.6
polymyxin resistance protein pmriNCTC13560_02216Not AvailablePositive2349895 - 235092038034.8

Displaying genes 2201 – 2210 of 3990 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
BacteremiaCausesPMC9652132
PneumoniaCausesPMC9652132
MeningitisCausesPMC9652132
MyositisCausesPMC9652132
KeratitisCausesPMC9652132

Displaying health effects 1 – 5 of 5 in total