Capnocytophaga granulosa strain NCTC12948

Rodfacultative aerobe/anaerobe / microaerophile

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Capnocytophaga

Description

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusCapnocytophaga
SpeciesCapnocytophaga granulosa
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe / microaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatBM; oral cavity; plaque; subgingival plaque (SUBP); SUPP; SV; TD; tongue; tongue-dorsum
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Capnocytophaga granulosa strain NCTC12948

Accession NumberUFVE00000000.1

Gene Summary

Adenine Count

828597 bp

Thymine Count

834164 bp

Guanine Count

590053 bp

Cytosine Count

590983 bp

Genome Length

2843797 bp

Protein-coding Genes

2567 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
putative multidrug export atp-binding/permease protein sav1866NCTC12948_00041Not Available-31654 - 3339065073.8
adenosylmethionine-8-amino-7-oxononanoate aminotransferaseNCTC12948_00042Not Available+33542 - 3483148284.2
uncharacterised proteinNCTC12948_00043Not Available+34832 - 3554227019.6
predicted membrane protein (duf2157)NCTC12948_00044Not Available+35547 - 3676146301.5
uncharacterized membrane-anchored proteinNCTC12948_00045Not Available+36754 - 3729021145.9
orotidine 5'-phosphate decarboxylaseNCTC12948_00046Not Available+37330 - 3816931090.2
iron-dependent repressor iderNCTC12948_00047Not Available+38166 - 3882225359.6
protein of uncharacterised function (duf3298)NCTC12948_00048Not Available+38886 - 3966529476.3
transcriptional regulator spxNCTC12948_00049Not Available+39662 - 4001814134.1
nadh dehydrogenase-like protein sav0941NCTC12948_00050Not Available+40040 - 4135949380.2

Displaying genes 41 – 50 of 2631 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

266 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm00022412-demethylmenaquinone-8C50H70O2Chemical structure of 2-demethylmenaquinone-8Not available
Average703.0896Da
Monoisotopic702.5375815Da
BASm0002780orotidine 5'-phosphateC10H10N2O11PNot available2149-82-8
Average365.168Da
Monoisotopic365.003866888Da

Displaying 1–10 of 266 metabolites