Campylobacter upsaliensis strain NCTC12264

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Campylobacteraceae

Genus

Campylobacter

Description

Campylobacter upsaliensis strain NCTC12264 is a Gram-negative bacterium known for its pathogenic potential in various hosts. This strain has been identified in multiple species, including Homo sapiens (humans), Canis lupus familiaris (domestic dogs), and Felis catus (domestic cats). The presence of C. upsaliensis in these hosts indicates its ability to adapt and thrive in diverse environments, potentially facilitating zoonotic transmission. The genome of C. upsaliensis strain NCTC12264 consists of a single replicon, which is characteristic of many bacterial species, simplifying its genetic organization and replication process. The strain is cataloged under the accession number UFUZ00000000.1, providing a reference point for further genomic studies and analyses. Ecologically, the presence of Campylobacter upsaliensis in both domestic animals and humans highlights the importance of monitoring this bacterium in veterinary and public health contexts. Its ability to infect multiple hosts suggests a potential for cross-species transmission, raising concerns about food safety and the risks associated with handling contaminated animal products. Understanding the interactions of C. upsaliensis within these hosts can provide insights into its pathogenic mechanisms and inform strategies for prevention and control of infections in both animal and human populations.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyCampylobacteraceae
GenusCampylobacter
SpeciesCampylobacter upsaliensis
Strainstrain NCTC12264

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Campylobacter upsaliensis strain NCTC12264
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Homo sapiens, Canis lupus familiaris, Felis catus
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Campylobacter upsaliensis strain NCTC12264 genome assembly,

Gene Summary

Adenine Count

618183 bp

Thymine Count

607341 bp

Guanine Count

318321 bp

Cytosine Count

316797 bp

Genome Length

1860642 bp

Protein-coding Genes

1955 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lsu ribosomal protein l11p (l12e)NCTC12264_00280Not AvailablePositive230817 - 23124215078.5
lsu ribosomal protein l1p (l10ae)NCTC12264_00281Not AvailablePositive231298 - 23199925077.8
lsu ribosomal protein l10p (p0)NCTC12264_00282Not AvailablePositive232143 - 23262517828.6
lsu ribosomal protein l7/l12 (p1/p2)NCTC12264_00283Not AvailablePositive232639 - 23301612987.5
dna-directed rna polymerase subunit betaNCTC12264_00284Not AvailablePositive233117 - 237250156047.0
dna-directed rna polymerase subunit beta'NCTC12264_00285Not AvailablePositive237243 - 241796168835.0
lclr family transcriptional regulatorNCTC12264_00286Not AvailableNegative242030 - 2422759311.14
altronate hydrolase c-terminusNCTC12264_00287Not AvailablePositive242458 - 2426256298.57
short chain dehydrogenaseNCTC12264_00288Not AvailablePositive242631 - 24320621886.4
30s ribosomal protein s12NCTC12264_00289Not AvailablePositive243445 - 24382814017.3

Displaying genes 301 – 310 of 2021 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

82 records
Metabolite IDMetabolite nameStructureCAS number
BASm00055001-octadecanoyl-sn-glycero-3-phosphateC21H41O7PChemical structure of 1-octadecanoyl-sn-glycero-3-phosphateNot available
Average436.5198Da
Monoisotopic436.2589902Da
BASm0014033AmmoniaH3NChemical structure of Ammonia7664-41-7
Average17.0305Da
Monoisotopic17.026549101Da
BASm0014041Oleic acidC18H34O2Chemical structure of Oleic acid112-80-1
Average282.4614Da
Monoisotopic282.255880332Da
BASm0014058Myristic acidC14H28O2Chemical structure of Myristic acid544-63-8
Average228.3709Da
Monoisotopic228.20893014Da
BASm0014182Vaccenic acidC18H34O2Chemical structure of Vaccenic acidNULL
Average282.468Da
Monoisotopic282.255880335Da
BASm0014219Palmitoleic acidC16H30O2Chemical structure of Palmitoleic acidNULL
Average254.4082Da
Monoisotopic254.224580204Da
BASm0014222DiethanolamineC4H11NO2Chemical structure of DiethanolamineNULL
Average105.1356Da
Monoisotopic105.078978601Da
BASm0017263NADPC21H29N7O17P3Chemical structure of NADP53-59-8
Average744.4129Da
Monoisotopic744.083277073Da
BASm0017395CDP-DG(16:0/18:1(9Z))C46H83N3O15P2Chemical structure of CDP-DG(16:0/18:1(9Z))NULL
Average980.124Da
Monoisotopic979.529942981Da
BASm0017399CDP-DG(18:0/18:1(9Z))C48H87N3O15P2Chemical structure of CDP-DG(18:0/18:1(9Z))NULL
Average1008.178Da
Monoisotopic1007.561243109Da

Displaying 1–10 of 82 metabolites

Health Effects

No health effects information available for this bacterium.