Scardovia inopinata strain NCTC12937

Gram-positiveovoidAnaerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Bifidobacteriales

Family

Bifidobacteriaceae

Genus

Scardovia

Description

Scardovia inopinata strain NCTC12937 is a gram-positive, anaerobic bacterium characterized by its ovoid shape. This strain is notable for possessing a single replicon, which is an important feature for understanding its genetic structure and replication dynamics. The strain has been assigned the accession number UFTI00000000.1, indicating its identification and classification within microbial databases. As an anaerobe, Scardovia inopinata thrives in environments devoid of oxygen, which may influence its ecological niche and potential interactions with other microbial species. The anaerobic nature suggests that this bacterium could play a role in specific biological processes, such as fermentation or the breakdown of organic matter in anaerobic environments. Understanding the traits of Scardovia inopinata can provide insights into its ecological role and potential applications in microbiology. Its unique characteristics may allow it to contribute to the microbial diversity within its habitat, possibly affecting nutrient cycling and interactions within microbial communities. Further research into its ecological functions could reveal more about its significance in anaerobic ecosystems.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderBifidobacteriales
FamilyBifidobacteriaceae
GenusScardovia
SpeciesScardovia inopinata
Strainstrain NCTC12937

Profile

Physiology
Gram staining propertiesPositive
Shapeovoid
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Scardovia inopinata strain NCTC12937 genome assembly, contig:

Gene Summary

Adenine Count

472720 bp

Thymine Count

468375 bp

Guanine Count

441647 bp

Cytosine Count

447986 bp

Genome Length

1830728 bp

Protein-coding Genes

1499 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
30s ribosomal protein s18NCTC12937_00534Not AvailableNegative625214 - 6254719751.1
single-stranded dna-binding proteinNCTC12937_00535Not AvailableNegative625543 - 62621122724.4
30s ribosomal protein s6NCTC12937_00536Not AvailableNegative626326 - 62662211189.4
proteinNCTC12937_00537Not AvailableNegative626808 - 62772833751.0
dtdp-glucose 4,6-dehydrataseNCTC12937_00538Not AvailableNegative627743 - 62894544660.4
udp-galactopyranose mutaseNCTC12937_00539Not AvailablePositive629063 - 63025345841.5
Trna-serNot AvailableNot AvailablePositive630495 - 630579Not Available
anthranilate phosphoribosyltransferase trpdNCTC12937_00541Not AvailablePositive631137 - 63215936126.1
bifunctional protein, includes tryptophan synthase subunit beta and indole-3-glycerol phosphate synthaseNCTC12937_00542Not AvailablePositive632179 - 63303330905.6
n-(5'-phosphoribosyl)anthranilate isomeraseNCTC12937_00543Not AvailablePositive633026 - 63374226216.4

Displaying genes 531 – 540 of 1552 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.