Scardovia inopinata strain NCTC12937

Gram-positiveovoidAnaerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Bifidobacteriales

Family

Bifidobacteriaceae

Genus

Scardovia

Description

Scardovia inopinata strain NCTC12937 is a gram-positive, anaerobic bacterium characterized by its ovoid shape. This strain is notable for possessing a single replicon, which is an important feature for understanding its genetic structure and replication dynamics. The strain has been assigned the accession number UFTI00000000.1, indicating its identification and classification within microbial databases. As an anaerobe, Scardovia inopinata thrives in environments devoid of oxygen, which may influence its ecological niche and potential interactions with other microbial species. The anaerobic nature suggests that this bacterium could play a role in specific biological processes, such as fermentation or the breakdown of organic matter in anaerobic environments. Understanding the traits of Scardovia inopinata can provide insights into its ecological role and potential applications in microbiology. Its unique characteristics may allow it to contribute to the microbial diversity within its habitat, possibly affecting nutrient cycling and interactions within microbial communities. Further research into its ecological functions could reveal more about its significance in anaerobic ecosystems.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderBifidobacteriales
FamilyBifidobacteriaceae
GenusScardovia
SpeciesScardovia inopinata
Strainstrain NCTC12937

Profile

Physiology
Gram staining propertiesPositive
Shapeovoid
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Scardovia inopinata strain NCTC12937 genome assembly, contig:

Gene Summary

Adenine Count

472720 bp

Thymine Count

468375 bp

Guanine Count

441647 bp

Cytosine Count

447986 bp

Genome Length

1830728 bp

Protein-coding Genes

1499 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
arginine deiminaseNCTC12937_00454Not AvailableNegative541692 - 54301449425.8
abc transporter atp-binding proteinNCTC12937_00455Not AvailableNegative543216 - 54519272951.8
amidotransferaseNCTC12937_00456Not AvailableNegative545192 - 54591126033.2
cysteine--trna ligaseNCTC12937_00457Not AvailablePositive546069 - 54783864653.9
signal recognition particle proteinNCTC12937_00458Not AvailablePositive547872 - 54953659367.2
endonuclease/exonuclease/phosphatase family proteinNCTC12937_00459Not AvailablePositive549784 - 55091441062.8
rna-binding proteinNCTC12937_00460Not AvailableNegative551316 - 5515498673.4
30s ribosomal protein s16NCTC12937_00461Not AvailableNegative551552 - 55206719274.7
trna (guanine-n(1)-)-methyltransferaseNCTC12937_00462Not AvailableNegative552486 - 55332830834.6
16s rrna processing protein rimmNCTC12937_00463Not AvailableNegative553441 - 55410623986.2

Displaying genes 451 – 460 of 1552 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.