Scardovia inopinata strain NCTC12937

Gram-positiveovoidAnaerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Bifidobacteriales

Family

Bifidobacteriaceae

Genus

Scardovia

Description

Scardovia inopinata strain NCTC12937 is a gram-positive, anaerobic bacterium characterized by its ovoid shape. This strain is notable for possessing a single replicon, which is an important feature for understanding its genetic structure and replication dynamics. The strain has been assigned the accession number UFTI00000000.1, indicating its identification and classification within microbial databases. As an anaerobe, Scardovia inopinata thrives in environments devoid of oxygen, which may influence its ecological niche and potential interactions with other microbial species. The anaerobic nature suggests that this bacterium could play a role in specific biological processes, such as fermentation or the breakdown of organic matter in anaerobic environments. Understanding the traits of Scardovia inopinata can provide insights into its ecological role and potential applications in microbiology. Its unique characteristics may allow it to contribute to the microbial diversity within its habitat, possibly affecting nutrient cycling and interactions within microbial communities. Further research into its ecological functions could reveal more about its significance in anaerobic ecosystems.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderBifidobacteriales
FamilyBifidobacteriaceae
GenusScardovia
SpeciesScardovia inopinata
Strainstrain NCTC12937

Profile

Physiology
Gram staining propertiesPositive
Shapeovoid
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Scardovia inopinata strain NCTC12937 genome assembly, contig:

Gene Summary

Adenine Count

472720 bp

Thymine Count

468375 bp

Guanine Count

441647 bp

Cytosine Count

447986 bp

Genome Length

1830728 bp

Protein-coding Genes

1499 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
periplasmic-binding protein/laci transcriptional regulatorNCTC12937_01281Not AvailablePositive1511583 - 151264739155.9
glycosyl hydrolase family proteinNCTC12937_01282Not AvailablePositive1512724 - 151478775639.0
periplasmic binding protein and sugar binding domain of the laci family proteinNCTC12937_01283Not AvailablePositive1514831 - 151590739089.7
sugars abc transporter substrate-binding proteinNCTC12937_01284Not AvailablePositive1516137 - 151746848196.5
malf-type abc sugar transport systems permease componentNCTC12937_01285Not AvailablePositive1517477 - 151839434220.4
abc transporter permeaseNCTC12937_01286Not AvailablePositive1518424 - 151938336155.7
tesb acyl-coa thioesteraseNCTC12937_01287Not AvailableNegative1519450 - 152034333166.6
abc transporter atp-binding proteinNCTC12937_01288Not AvailableNegative1520363 - 152204262022.7
predicted transcriptional regulatorNCTC12937_01289Not AvailablePositive1522243 - 15224949571.6
Trna-metNot AvailableNot AvailablePositive1522563 - 1522639Not Available

Displaying genes 1271 – 1280 of 1552 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.