Mycobacterium shimoidei strain P7336

aerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Mycobacteriaceae

Genus

Mycobacterium

Description

Mycobacterium shimoidei strain P7336 is an aerobic bacterium, indicating that it requires oxygen for growth and metabolic processes. This characteristic is essential for its survival and ecological role in environments where oxygen is available. The organism possesses flagella, which are whip-like structures that can facilitate motility. This feature may enable M. shimoidei strain P7336 to navigate through its environment, potentially aiding in its colonization and interaction with other microbes. Genetically, M. shimoidei strain P7336 has a single replicon, suggesting that it has a streamlined genomic structure that may influence its replication and overall cellular processes. The strain is cataloged under the accession number UEGW00000000.1 in genomic databases, providing a reference for researchers studying its characteristics and potential applications. From a biological or ecological perspective, the combination of aerobic metabolism and motility suggests that Mycobacterium shimoidei strain P7336 may thrive in environments with ample oxygen supply, such as soil or water systems. Its ability to move could facilitate its role in biogeochemical cycles, particularly in the decomposition of organic matter, or in interactions with other microbial communities. Understanding these traits can provide insight into the ecological dynamics of mycobacterial species in their natural habitats.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyMycobacteriaceae
GenusMycobacterium
SpeciesMycobacterium shimoidei
Strainstrain P7336

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mycobacterium shimoidei strain P7336 genome assembly, contig:

Gene Summary

Adenine Count

827277 bp

Thymine Count

830940 bp

Guanine Count

1593150 bp

Cytosine Count

1591216 bp

Genome Length

4842631 bp

Protein-coding Genes

4593 genes

Non-Coding Genes

106 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinMSP7336_00294Not AvailableNegative281331 - 28217629359.6
putative endonuclease iv end (endodeoxyribonuclease iv) (apurinase)MSP7336_00295Not AvailableNegative282180 - 28293526821.6
dna-directed rna polymerase (beta' chain) rpoc (transcriptase beta' chain) (rna polymerase beta' subunit)MSP7336_00296Not AvailableNegative283028 - 286978146708.0
dna-directed rna polymerase (beta chain) rpob (transcriptase beta chain) (rna polymerase beta subunit)MSP7336_00297Not AvailableNegative287014 - 290538129770.0
putative ribonucleotide-transport atp-binding protein abc transporter mklMSP7336_00298Not AvailableNegative290935 - 29199638844.8
putative dioxygenaseMSP7336_00299Not AvailableNegative292127 - 29362954792.6
putative transcriptional regulatory protein (probably tetr-family)MSP7336_00300Not AvailablePositive293756 - 29441823426.0
50s ribosomal protein l7/l12 rpll (sa1)MSP7336_00301Not AvailableNegative294445 - 29484313623.3
50s ribosomal protein l10 rpljMSP7336_00302Not AvailableNegative294886 - 29554222082.0
hypothetical proteinMSP7336_00303Not AvailableNegative295737 - 29616815056.8

Displaying genes 361 – 370 of 1593 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.