Mycobacterium shimoidei strain P7336

aerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Mycobacteriaceae

Genus

Mycobacterium

Description

Mycobacterium shimoidei strain P7336 is an aerobic bacterium, indicating that it requires oxygen for growth and metabolic processes. This characteristic is essential for its survival and ecological role in environments where oxygen is available. The organism possesses flagella, which are whip-like structures that can facilitate motility. This feature may enable M. shimoidei strain P7336 to navigate through its environment, potentially aiding in its colonization and interaction with other microbes. Genetically, M. shimoidei strain P7336 has a single replicon, suggesting that it has a streamlined genomic structure that may influence its replication and overall cellular processes. The strain is cataloged under the accession number UEGW00000000.1 in genomic databases, providing a reference for researchers studying its characteristics and potential applications. From a biological or ecological perspective, the combination of aerobic metabolism and motility suggests that Mycobacterium shimoidei strain P7336 may thrive in environments with ample oxygen supply, such as soil or water systems. Its ability to move could facilitate its role in biogeochemical cycles, particularly in the decomposition of organic matter, or in interactions with other microbial communities. Understanding these traits can provide insight into the ecological dynamics of mycobacterial species in their natural habitats.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyMycobacteriaceae
GenusMycobacterium
SpeciesMycobacterium shimoidei
Strainstrain P7336

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mycobacterium shimoidei strain P7336 genome assembly, contig:

Gene Summary

Adenine Count

827277 bp

Thymine Count

830940 bp

Guanine Count

1593150 bp

Cytosine Count

1591216 bp

Genome Length

4842631 bp

Protein-coding Genes

4593 genes

Non-Coding Genes

106 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
translation initiation factor if-1 infaMSP7336_00194Not AvailableNegative195612 - 19589311000.5
hypothetical proteinMSP7336_00195Not AvailablePositive196153 - 19700730542.2
dtdp-glucose 4,6-dehydratase rmlbMSP7336_00196Not AvailablePositive197034 - 19802936960.0
dtdp-4-dehydrorhamnose 3,5-epimerase rmlc (dtdp-4-keto-6-deoxyglucose 3,5-epimerase) (dtdp-l-rhamnose synthetase) (thymidine diphospho-4-keto-rhamnose 3,5-epimerase)MSP7336_00197Not AvailablePositive198031 - 19863322333.3
hypothetical proteinMSP7336_00198Not AvailableNegative198630 - 19938828060.1
hypothetical proteinMSP7336_00199Not AvailablePositive199433 - 20024229188.7
hypothetical proteinMSP7336_00200Not AvailablePositive200346 - 2005737825.23
putative methylmalonate-semialdehyde dehydrogenase mmsa (methylmalonic acid semialdehyde dehydrogenase) (mmsdh)MSP7336_00201Not AvailablePositive200669 - 20218954101.4
putative acyl-coa dehydrogenase fade9MSP7336_00202Not AvailablePositive202197 - 20336341463.3
putative 3-hydroxyisobutyrate dehydrogenase mmsb (hibadh)MSP7336_00203Not AvailablePositive203376 - 20425129131.9

Displaying genes 261 – 270 of 1593 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.