Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium shimoidei |
| Strain | strain P7336 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
827277 bp
Thymine Count
830940 bp
Guanine Count
1593150 bp
Cytosine Count
1591216 bp
Genome Length
4842631 bp
Protein-coding Genes
4593 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative cytidine deaminase cdd (cytidine aminohydrolase) (cytidine nucleoside deaminase) | MSP7336_00064 | Not Available | Negative | 60990 - 61388 | 13862.7 |
| succinate dehydrogenase hydrophobic membrane anchor protein | MSP7336_00065 | Not Available | Positive | 61594 - 61995 | 15091.9 |
| putative succinate dehydrogenase (hydrophobic membrane anchor subunit) sdhd (succinic dehydrogenase) (fumarate reductase) (fumarate dehydrogenase) (fumaric hydrogenase) | MSP7336_00066 | Not Available | Positive | 61992 - 62426 | 16968.7 |
| putative succinate dehydrogenase (flavoprotein subunit) sdha (succinic dehydrogenase) (fumarate reductase) (fumarate dehydrogenase) (fumaric hydrogenase) | MSP7336_00067 | Not Available | Positive | 62423 - 64177 | 64212.5 |
| succinate dehydrogenase iron-sulfur subunit | MSP7336_00068 | Not Available | Positive | 64177 - 64971 | 29587.7 |
| putative transposase fusion protein | MSP7336_00069 | Not Available | Positive | 65116 - 65703 | 21921.1 |
| pyridoxamine 5'-phosphate oxidase-like fmn-binding protein | MSP7336_00070 | Not Available | Negative | 65687 - 66169 | 17436.1 |
| putative alternative rna polymerase sigma factor (fragment) sigj | MSP7336_00071 | Not Available | Negative | 66190 - 67110 | 33015.1 |
| hypothetical protein | MSP7336_00072 | Not Available | Positive | 67265 - 67951 | 21646.5 |
| hypothetical protein | MSP7336_00073 | Not Available | Positive | 68001 - 69356 | 49266.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


