Mycobacterium shimoidei strain P7336

aerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Mycobacteriaceae

Genus

Mycobacterium

Description

Mycobacterium shimoidei strain P7336 is an aerobic bacterium, indicating that it requires oxygen for growth and metabolic processes. This characteristic is essential for its survival and ecological role in environments where oxygen is available. The organism possesses flagella, which are whip-like structures that can facilitate motility. This feature may enable M. shimoidei strain P7336 to navigate through its environment, potentially aiding in its colonization and interaction with other microbes. Genetically, M. shimoidei strain P7336 has a single replicon, suggesting that it has a streamlined genomic structure that may influence its replication and overall cellular processes. The strain is cataloged under the accession number UEGW00000000.1 in genomic databases, providing a reference for researchers studying its characteristics and potential applications. From a biological or ecological perspective, the combination of aerobic metabolism and motility suggests that Mycobacterium shimoidei strain P7336 may thrive in environments with ample oxygen supply, such as soil or water systems. Its ability to move could facilitate its role in biogeochemical cycles, particularly in the decomposition of organic matter, or in interactions with other microbial communities. Understanding these traits can provide insight into the ecological dynamics of mycobacterial species in their natural habitats.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyMycobacteriaceae
GenusMycobacterium
SpeciesMycobacterium shimoidei
Strainstrain P7336

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mycobacterium shimoidei strain P7336 genome assembly, contig:

Gene Summary

Adenine Count

827277 bp

Thymine Count

830940 bp

Guanine Count

1593150 bp

Cytosine Count

1591216 bp

Genome Length

4842631 bp

Protein-coding Genes

4593 genes

Non-Coding Genes

106 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative cytidine deaminase cdd (cytidine aminohydrolase) (cytidine nucleoside deaminase)MSP7336_00064Not AvailableNegative60990 - 6138813862.7
succinate dehydrogenase hydrophobic membrane anchor proteinMSP7336_00065Not AvailablePositive61594 - 6199515091.9
putative succinate dehydrogenase (hydrophobic membrane anchor subunit) sdhd (succinic dehydrogenase) (fumarate reductase) (fumarate dehydrogenase) (fumaric hydrogenase)MSP7336_00066Not AvailablePositive61992 - 6242616968.7
putative succinate dehydrogenase (flavoprotein subunit) sdha (succinic dehydrogenase) (fumarate reductase) (fumarate dehydrogenase) (fumaric hydrogenase)MSP7336_00067Not AvailablePositive62423 - 6417764212.5
succinate dehydrogenase iron-sulfur subunitMSP7336_00068Not AvailablePositive64177 - 6497129587.7
putative transposase fusion proteinMSP7336_00069Not AvailablePositive65116 - 6570321921.1
pyridoxamine 5'-phosphate oxidase-like fmn-binding proteinMSP7336_00070Not AvailableNegative65687 - 6616917436.1
putative alternative rna polymerase sigma factor (fragment) sigjMSP7336_00071Not AvailableNegative66190 - 6711033015.1
hypothetical proteinMSP7336_00072Not AvailablePositive67265 - 6795121646.5
hypothetical proteinMSP7336_00073Not AvailablePositive68001 - 6935649266.4

Displaying genes 131 – 140 of 1593 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.