Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Lysozyme | SAMEA3485113_00386 | Not Available | Negative | 379709 - 380206 | 17976.8 |
| Putative holin | SAMEA3485113_00387 | Not Available | Negative | 380206 - 380421 | 7792.52 |
| arac-type regulatory protein from bacteriophage origin | SAMEA3485113_00388 | Not Available | Negative | 380610 - 381341 | 27843.1 |
| putative pathogenicity island protein | SAMEA3485113_00389 | Not Available | Negative | 381693 - 381911 | 8526.28 |
| Insertion element is2 transposase insd | SAMEA3485113_00390 | Not Available | Negative | 381924 - 382829 | 34338.9 |
| Isrso10-transposase orfa protein | SAMEA3485113_00391 | Not Available | Negative | 382787 - 383152 | 13452.4 |
| o-antigen chain length determinant wzz | SAMEA3485113_00392 | Not Available | Negative | 383241 - 383537 | 10722.1 |
| Udp-glucose 6-dehydrogenase | SAMEA3485113_00393 | Not Available | Negative | 383683 - 384849 | 43629.2 |
| 6-phosphogluconate dehydrogenase | SAMEA3485113_00394 | Not Available | Negative | 385098 - 386504 | 51441.1 |
| Adenine dna methyltransferase | SAMEA3485113_01298 | Not Available | Negative | 1341634 - 1342398 | 27934.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





