Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| toxin chpa | SAMEA3485113_00584 | Not Available | Positive | 610694 - 611038 | 12817.6 |
| major capsid protein | SAMEA3485113_00585 | Not Available | Negative | 611082 - 612353 | 47177.3 |
| uncharacterised protein | SAMEA3485113_00586 | Not Available | Negative | 612353 - 613063 | 26182.3 |
| uncharacterised protein | SAMEA3485113_00587 | Not Available | Positive | 613228 - 613461 | 9179.04 |
| dna-binding transcriptional regulator prophage remnant | SAMEA3485113_00588 | Not Available | Negative | 613512 - 613694 | 6902.26 |
| integrase/recombinase, phage integrase family | SAMEA3485113_00589 | Not Available | Negative | 614874 - 615878 | 38427.0 |
| dna primase (bacterial type) | SAMEA3485113_00590 | Not Available | Negative | 615881 - 618550 | 100697.0 |
| uncharacterised protein | SAMEA3485113_00591 | Not Available | Negative | 618599 - 618898 | 11095.2 |
| uncharacterised protein | SAMEA3485113_00592 | Not Available | Negative | 618967 - 619185 | 7876.49 |
| uncharacterised protein | SAMEA3485113_00593 | Not Available | Negative | 619182 - 619373 | 7410.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





