Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug resistance protein y | SAMEA3485113_00574 | Not Available | Positive | 592479 - 594017 | 55962.4 |
| d-serine dehydratase | SAMEA3485113_00575 | Not Available | Negative | 594126 - 595454 | 47898.3 |
| permease dsdx | SAMEA3485113_00576 | Not Available | Negative | 595472 - 596809 | 47126.1 |
| dna-binding transcriptional regulator dsdc | SAMEA3485113_00577 | Not Available | Positive | 597027 - 597974 | 35931.8 |
| type 1 fimbriae regulatory protein | SAMEA3485113_00578 | Not Available | Negative | 598371 - 598940 | 22043.1 |
| type 1 fimbriae regulatory protein | SAMEA3485113_00579 | Not Available | Positive | 599689 - 600318 | 24197.4 |
| luxr family transcriptional regulator | SAMEA3485113_00580 | Not Available | Positive | 600636 - 601256 | 24012.3 |
| outer membrane autotransporter domain protein | SAMEA3485113_00581 | Not Available | Positive | 601281 - 609194 | 269824.0 |
| putative outer membrane protein | SAMEA3485113_00582 | Not Available | Positive | 609254 - 609772 | 19299.4 |
| growth regulator | SAMEA3485113_00583 | Not Available | Positive | 610446 - 610694 | 9008.82 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





