Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoprotein ypdi | SAMEA3485113_00564 | Not Available | Negative | 579687 - 579962 | 10097.3 |
| protein | SAMEA3485113_00565 | Not Available | Positive | 580258 - 580890 | 22893.3 |
| putative transferase | SAMEA3485113_00566 | Not Available | Positive | 581402 - 582652 | 45816.7 |
| oxalyl-coa decarboxylase | SAMEA3485113_00567 | Not Available | Positive | 582706 - 584400 | 60570.8 |
| transporter yfdv | SAMEA3485113_00568 | Not Available | Positive | 584470 - 585414 | 33617.9 |
| coa-transferase | SAMEA3485113_00569 | Not Available | Positive | 585488 - 586633 | 41661.2 |
| hybrid sensory histidine kinase in two-component regulatory system with evga | SAMEA3485113_00570 | Not Available | Negative | 586689 - 589103 | 90487.3 |
| hybrid sensory histidine kinase in two-component regulatory system with evga | SAMEA3485113_00571 | Not Available | Negative | 589124 - 590281 | 43555.5 |
| dna-binding transcriptional activator evga | SAMEA3485113_00572 | Not Available | Negative | 590286 - 590900 | 22691.5 |
| emrky-tolc multidrug resistance efflux pump, membrane fusion protein component | SAMEA3485113_00573 | Not Available | Positive | 591316 - 592479 | 42587.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





