Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative carbohydrate/pyrimidine kinase | SAMEA3485113_00461 | Not Available | Positive | 462569 - 463534 | 34481.6 |
| gntr family transcriptional regulator | SAMEA3485113_00462 | Not Available | Negative | 463508 - 464254 | 28305.9 |
| 1,4-beta-n-acetylmuramidase | SAMEA3485113_00463 | Not Available | Negative | 464306 - 465124 | 31701.9 |
| phosphomethylpyrimidine kinase | SAMEA3485113_00464 | Not Available | Negative | 465189 - 465989 | 28609.2 |
| hydroxyethylthiazole kinase | SAMEA3485113_00465 | Not Available | Negative | 465986 - 466774 | 27306.6 |
| uncharacterised protein | SAMEA3485113_00467 | Not Available | Positive | 466937 - 467056 | 4787.74 |
| transcriptional repressor rcnr | SAMEA3485113_00468 | Not Available | Negative | 466997 - 467269 | 10182.5 |
| nickel/cobalt efflux protein rcna | SAMEA3485113_00469 | Not Available | Positive | 467390 - 468220 | 30765.7 |
| periplasmic modulator of ni and co efflux | SAMEA3485113_00470 | Not Available | Positive | 468439 - 468777 | 12466.8 |
| putative fimbrial adhesin | SAMEA3485113_00471 | Not Available | Negative | 468859 - 469893 | 36967.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





