Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein | SAMEA3485113_00336 | Not Available | Positive | 333502 - 333831 | 11852.5 |
| putative outer membrane autotransporter barrel, putative pectin lyase fold | SAMEA3485113_00337 | Not Available | Negative | 333887 - 334948 | 38985.7 |
| putative outer membrane autotransporter barrel, putative pectin lyase fold | SAMEA3485113_00338 | Not Available | Negative | 334945 - 336549 | 55769.4 |
| inner membrane protein that interacts with cell division proteins | SAMEA3485113_00339 | Not Available | Negative | 336949 - 337167 | 8242.35 |
| putative signal transduction protein | SAMEA3485113_00340 | Not Available | Negative | 337299 - 338822 | 56852.1 |
| protein involved in biofilm formation | SAMEA3485113_00341 | Not Available | Negative | 339158 - 339406 | 9701.79 |
| regulator of acid resistance, influenced by indole | SAMEA3485113_00342 | Not Available | Negative | 339519 - 339785 | 9737.62 |
| protein | SAMEA3485113_00343 | Not Available | Negative | 340129 - 340365 | 8694.37 |
| putative signal transduction protein | SAMEA3485113_00344 | Not Available | Positive | 340679 - 341890 | 45281.4 |
| merr family transcriptional regulator | SAMEA3485113_00345 | Not Available | Positive | 342095 - 342826 | 28266.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





