Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein sirb1 | SAMEA3485113_00285 | Not Available | Negative | 279936 - 280745 | 30843.1 |
| transcriptional regulator | SAMEA3485113_00286 | Not Available | Negative | 280749 - 281141 | 14667.8 |
| protein methyltransferase hemk (protein-glutamine n methyltransferase) | SAMEA3485113_00287 | Not Available | Negative | 281138 - 281971 | 30946.7 |
| peptide chain release factor 1 | SAMEA3485113_00288 | Not Available | Negative | 281971 - 283053 | 40519.6 |
| glutamyl-trna reductase | SAMEA3485113_00289 | Not Available | Negative | 283095 - 284420 | 48913.9 |
| outer membrane lipoprotein lolb | SAMEA3485113_00290 | Not Available | Positive | 284565 - 285188 | 23552.1 |
| 4-diphosphocytidyl-2-c-methyl-d-erythritol kinase | SAMEA3485113_00291 | Not Available | Positive | 285188 - 286039 | 30956.2 |
| ribose-phosphate pyrophosphokinase | SAMEA3485113_00292 | Not Available | Positive | 286124 - 287137 | 36651.3 |
| sulfate transporter ychm | SAMEA3485113_00293 | Not Available | Positive | 287289 - 288941 | 58406.6 |
| putative membrane protein ychh | SAMEA3485113_00294 | Not Available | Negative | 288996 - 289274 | 10486.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





