Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | SAMEA3485113_00210 | Not Available | Negative | 208187 - 209356 | 44533.6 |
| inner membrane protein | SAMEA3485113_00211 | Not Available | Negative | 209363 - 209671 | 11324.1 |
| phosphatidylglycerophosphatase b | SAMEA3485113_00212 | Not Available | Negative | 209820 - 210584 | 28920.8 |
| gtp cyclohydrolase ii | SAMEA3485113_00213 | Not Available | Positive | 210754 - 211344 | 21837.3 |
| aconitate hydratase 1 | SAMEA3485113_00214 | Not Available | Negative | 211408 - 214083 | 97874.1 |
| protein, c-ter fragment, truncated protein | SAMEA3485113_00216 | Not Available | Negative | 214456 - 214623 | 6326.17 |
| small predicted membrane protein | SAMEA3485113_00217 | Not Available | Negative | 214626 - 214754 | 4866.05 |
| hth-type transcriptional regulator cysb | SAMEA3485113_00218 | Not Available | Negative | 215085 - 216059 | 36152.5 |
| dna topoisomerase i | SAMEA3485113_00219 | Not Available | Negative | 216270 - 218867 | 97342.0 |
| protein | SAMEA3485113_00220 | Not Available | Positive | 219247 - 219498 | 9386.17 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





