Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-tartrate dehydratase subunit alpha | SAMEA3485113_00098 | Not Available | Negative | 95531 - 96442 | 32677.5 |
| transcriptional activator ttdr | SAMEA3485113_00099 | Not Available | Positive | 96649 - 97581 | 35344.7 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 97940 - 98054 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 98185 - 98290 | Not Available |
| glycerol-3-phosphate acyltransferase plsy | SAMEA3485113_00100 | Not Available | Negative | 97594 - 98211 | 22194.7 |
| bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase | SAMEA3485113_00101 | Not Available | Positive | 98316 - 98684 | 13620.2 |
| undecaprenyl pyrophosphate phosphatase | SAMEA3485113_00102 | Not Available | Positive | 98775 - 99596 | 29774.7 |
| multifunctional cca protein | SAMEA3485113_00103 | Not Available | Negative | 99778 - 101016 | 46497.8 |
| signal transduction protein | SAMEA3485113_00104 | Not Available | Negative | 101080 - 101700 | 23077.7 |
| putative adenylate cyclase | SAMEA3485113_00105 | Not Available | Positive | 101942 - 103243 | 48513.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





