Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron/manganese transport system periplasmic binding protein sita | SAMEA3485113_05740 | Not Available | Positive | 5748799 - 5749713 | 33408.1 |
| plasmid replication protein | SAMEA3485113_05741 | Not Available | Negative | 5750665 - 5751141 | 17961.6 |
| uncharacterised protein | SAMEA3485113_05742 | Not Available | Negative | 5752405 - 5752773 | 13768.6 |
| putative antitoxin of toxin-antitoxin system | SAMEA3485113_05744 | Not Available | Positive | 5755696 - 5755947 | 9171.88 |
| rele plasmid addiction protein | SAMEA3485113_05745 | Not Available | Positive | 5755944 - 5756231 | 11116.8 |
| incf transfer protein tram | SAMEA3485113_05746 | Not Available | Positive | 5757169 - 5757552 | 14543.4 |
| conjugation transfer regulator | SAMEA3485113_05747 | Not Available | Positive | 5757743 - 5758168 | 16629.8 |
| phage protein | SAMEA3485113_05748 | Not Available | Positive | 5758549 - 5758980 | 15413.9 |
| transposase | SAMEA3485113_05749 | Not Available | Positive | 5759366 - 5759626 | 9648.81 |
| plasmid stabilisation system protein | SAMEA3485113_05750 | Not Available | Positive | 5764089 - 5764406 | 12164.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





