Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage tail protein | SAMEA3485113_05720 | Not Available | Negative | 5727565 - 5727855 | 10751.7 |
| serine protease pet precursor (plasmid-encoded toxin pet) | SAMEA3485113_05721 | Not Available | Positive | 5728008 - 5729087 | 39341.7 |
| putative integrase | SAMEA3485113_05722 | Not Available | Negative | 5729315 - 5730085 | 29657.4 |
| transposase | SAMEA3485113_05723 | Not Available | Negative | 5730230 - 5730370 | 5554.82 |
| uncharacterised protein | SAMEA3485113_05724 | Not Available | Positive | 5732007 - 5732294 | 11079.5 |
| putative phage dna packaging protein | SAMEA3485113_05725 | Not Available | Negative | 5732398 - 5733009 | 23310.1 |
| transcriptional regulator with plp domain | SAMEA3485113_05726 | Not Available | Positive | 5733981 - 5735000 | 37198.3 |
| putative prop effector | SAMEA3485113_05727 | Not Available | Positive | 5735566 - 5736045 | 18505.6 |
| uncharacterised protein | SAMEA3485113_05728 | Not Available | Negative | 5736064 - 5736612 | 20509.7 |
| putative replication protein | SAMEA3485113_05729 | Not Available | Positive | 5738360 - 5738893 | 20192.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





