Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| superoxide dismutase (cu-zn) | SAMEA3485113_05689 | Not Available | Negative | 5700467 - 5700991 | 18329.0 |
| abc-type uncharacterized transport system, periplasmic component | SAMEA3485113_05690 | Not Available | Negative | 5701087 - 5702067 | 35779.8 |
| tail fiber protein | SAMEA3485113_05691 | Not Available | Positive | 5702456 - 5702944 | 18263.0 |
| tail fiber assembly protein | SAMEA3485113_05692 | Not Available | Negative | 5703015 - 5703626 | 22613.9 |
| putative side tail fiber protein from lambdoid prophage | SAMEA3485113_05693 | Not Available | Negative | 5703626 - 5705605 | 70125.8 |
| uncharacterised protein | SAMEA3485113_05694 | Not Available | Positive | 5706169 - 5706435 | 9496.43 |
| uncharacterised protein | SAMEA3485113_05695 | Not Available | Positive | 5706575 - 5707798 | 48271.9 |
| uncharacterised protein | SAMEA3485113_05696 | Not Available | Negative | 5709445 - 5709798 | 13443.8 |
| tia invasion determinant | SAMEA3485113_05697 | Not Available | Negative | 5710011 - 5710754 | 27405.3 |
| putative lipoprotein | SAMEA3485113_05698 | Not Available | Positive | 5711070 - 5711423 | 13062.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





