Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pantothenate kinase | SAMEA3485113_05646 | Not Available | Positive | 5660608 - 5661534 | 35406.5 |
| bifunctional protein | SAMEA3485113_05647 | Not Available | Negative | 5661566 - 5662528 | 35202.9 |
| udp-n-acetylenolpyruvoylglucosamine reductase | SAMEA3485113_05648 | Not Available | Negative | 5662525 - 5663553 | 37849.2 |
| type iii secretion system protein | SAMEA3485113_05650 | Not Available | Positive | 5663980 - 5665230 | 46044.2 |
| type iii secretion system protein | SAMEA3485113_05651 | Not Available | Positive | 5665235 - 5666380 | 43504.6 |
| type iii secretion system protein | SAMEA3485113_05652 | Not Available | Positive | 5666373 - 5667872 | 54704.8 |
| uncharacterised protein | SAMEA3485113_05653 | Not Available | Positive | 5668319 - 5668501 | 6813.54 |
| putative retron-type reverse transcriptase | SAMEA3485113_05654 | Not Available | Positive | 5668523 - 5669662 | 43960.6 |
| cold shock protein cspc | SAMEA3485113_05655 | Not Available | Positive | 5669667 - 5669870 | 7966.66 |
| putative rnai modulator protein | SAMEA3485113_05657 | Not Available | Negative | 5670708 - 5670902 | 7237.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





