Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | SAMEA3485113_05626 | Not Available | Positive | 5640200 - 5640550 | 13215.2 |
| putative fimbrial chaperone | SAMEA3485113_05627 | Not Available | Positive | 5642032 - 5642769 | 27389.0 |
| aggregative adherence fimbria ii usher protein | SAMEA3485113_05628 | Not Available | Positive | 5642766 - 5645234 | 92159.0 |
| uncharacterised protein | SAMEA3485113_05629 | Not Available | Positive | 5645302 - 5645808 | 17168.0 |
| transposase for isec12 | SAMEA3485113_05630 | Not Available | Positive | 5646218 - 5647753 | 58968.3 |
| transposase | SAMEA3485113_05631 | Not Available | Positive | 5647770 - 5648525 | 28540.3 |
| glutaredoxin 1 | SAMEA3485113_05632 | Not Available | Positive | 5648817 - 5649110 | 11314.5 |
| doxx | SAMEA3485113_05633 | Not Available | Negative | 5649235 - 5649669 | 15785.0 |
| fibronectin type iii protein | SAMEA3485113_05634 | Not Available | Positive | 5650710 - 5651525 | 29419.0 |
| putative tail fiber protein from prophage | SAMEA3485113_05635 | Not Available | Positive | 5651584 - 5653263 | 58102.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





