Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative monomeric alkaline phosphatase phox | SAMEA3485113_05553 | Not Available | Positive | 5571821 - 5572468 | 23262.2 |
| putative integrase | SAMEA3485113_05554 | Not Available | Positive | 5572910 - 5573281 | 14816.7 |
| heat resistant agglutinin 1 | SAMEA3485113_05555 | Not Available | Positive | 5573792 - 5574508 | 26324.1 |
| putative membrane-associated, metal-dependent hydrolase | SAMEA3485113_05556 | Not Available | Positive | 5574683 - 5576185 | 55860.5 |
| shia-like protein | SAMEA3485113_05557 | Not Available | Negative | 5576544 - 5577587 | 40194.7 |
| prophage integrase | SAMEA3485113_05558 | Not Available | Negative | 5577843 - 5578121 | 10757.7 |
| uncharacterised protein | SAMEA3485113_05559 | Not Available | Positive | 5578435 - 5578596 | 5777.68 |
| uncharacterised protein | SAMEA3485113_05560 | Not Available | Negative | 5578600 - 5579232 | 23767.4 |
| replication protein | SAMEA3485113_05573 | Not Available | Negative | 5585082 - 5585783 | 27262.8 |
| putative mobilization protein c | SAMEA3485113_05574 | Not Available | Negative | 5586315 - 5586605 | 10784.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





