Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein conserved in bacteria with a cystatin-like fold | SAMEA3485113_05512 | Not Available | Positive | 5520582 - 5521034 | 17278.6 |
| envelope glycoprotein gp120 | SAMEA3485113_05513 | Not Available | Negative | 5523851 - 5524750 | 33815.8 |
| integrase core domain | SAMEA3485113_05514 | Not Available | Negative | 5526431 - 5527234 | 30009.1 |
| retroviral aspartyl protease | SAMEA3485113_05515 | Not Available | Negative | 5528765 - 5529139 | 14046.6 |
| transposase | SAMEA3485113_05516 | Not Available | Negative | 5530123 - 5530473 | 13171.1 |
| transposase | SAMEA3485113_05517 | Not Available | Negative | 5530470 - 5530895 | 15906.0 |
| putative transposase protein | SAMEA3485113_05518 | Not Available | Positive | 5531065 - 5532216 | 44248.1 |
| ybl169 | SAMEA3485113_05519 | Not Available | Positive | 5533108 - 5536611 | 123755.0 |
| is encoded protein | SAMEA3485113_05520 | Not Available | Negative | 5536862 - 5537080 | 8483.44 |
| putative aryl-alcohol dehydrogenase (nadp(+)) | SAMEA3485113_05521 | Not Available | Positive | 5537800 - 5538663 | 32083.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





