Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative type iii effector protein (leucine rich repeat protein) | SAMEA3485113_05376 | Not Available | Positive | 5406415 - 5407365 | 35901.2 |
| putative type iii effector protein (leucine rich repeat protein) | SAMEA3485113_05377 | Not Available | Positive | 5407813 - 5408991 | 44909.3 |
| putative transposase (fragment) | SAMEA3485113_05379 | Not Available | Positive | 5409329 - 5409580 | 9764.18 |
| ferric aerobactin receptor precusor iuta | SAMEA3485113_05380 | Not Available | Negative | 5409645 - 5411846 | 80794.3 |
| l-lysine 6-monooxygenase (lysine n(6)-hydroxylase) | SAMEA3485113_05381 | Not Available | Negative | 5411928 - 5413205 | 48809.3 |
| aerobactin siderophore biosynthesis protein | SAMEA3485113_05382 | Not Available | Negative | 5413202 - 5414944 | 66720.5 |
| aerobactin siderophore biosynthesis protein, n(6)-hydroxylysine acetylase | SAMEA3485113_05383 | Not Available | Negative | 5414944 - 5415891 | 37136.1 |
| aerobactin siderophore biosynthesis protein | SAMEA3485113_05384 | Not Available | Negative | 5415892 - 5417616 | 65352.9 |
| transport protein shif | SAMEA3485113_05385 | Not Available | Positive | 5417752 - 5418945 | 41615.9 |
| uncharacterised protein | SAMEA3485113_05386 | Not Available | Positive | 5420027 - 5420275 | 9278.12 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





