Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | SAMEA3485113_05363 | Not Available | Negative | 5389647 - 5390297 | 24277.4 |
| putative type i methylase | SAMEA3485113_05364 | Not Available | Positive | 5390541 - 5392040 | 56605.6 |
| putative type i methylase | SAMEA3485113_05365 | Not Available | Positive | 5392046 - 5393500 | 55683.5 |
| type i restriction-modification system subunit s | SAMEA3485113_05366 | Not Available | Positive | 5393497 - 5394651 | 44390.5 |
| hsdr family type i site-specific deoxyribonuclease | SAMEA3485113_05367 | Not Available | Positive | 5394656 - 5397718 | 116100.0 |
| type i restriction-modification system subunit s | SAMEA3485113_05368 | Not Available | Negative | 5397799 - 5398752 | 36338.1 |
| formate dehydrogenase-n subunit gamma | SAMEA3485113_05371 | Not Available | Negative | 5399183 - 5399836 | 25352.9 |
| formate dehydrogenase, nitrate-inducible, iron-sulfur subunit | SAMEA3485113_05372 | Not Available | Negative | 5399829 - 5400713 | 32240.4 |
| inner membrane protein | SAMEA3485113_05374 | Not Available | Positive | 5404062 - 5404886 | 29452.6 |
| outer membrane porin protein | SAMEA3485113_05375 | Not Available | Positive | 5405145 - 5406245 | 40982.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





