Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | SAMEA3485113_05353 | Not Available | Negative | 5382449 - 5383984 | 56160.9 |
| abc transporter substrate-binding protein | SAMEA3485113_05354 | Not Available | Negative | 5383957 - 5385123 | 42775.7 |
| uncharacterised protein | SAMEA3485113_05355 | Not Available | Positive | 5385149 - 5385316 | 6349.14 |
| putative restriction methylase | SAMEA3485113_05356 | Not Available | Negative | 5385354 - 5386139 | 30038.3 |
| cp4-44 prophage | SAMEA3485113_05357 | Not Available | Negative | 5386224 - 5386646 | 15460.2 |
| toxin of the yeev-yeeu toxin-antitoxin system | SAMEA3485113_05358 | Not Available | Negative | 5386609 - 5387019 | 15316.3 |
| antitoxin of the yeev-yeeu toxin-antitoxin system | SAMEA3485113_05359 | Not Available | Negative | 5387109 - 5387477 | 13757.3 |
| antitoxin of the yeev-yeeu toxin-antitoxin system | SAMEA3485113_05360 | Not Available | Negative | 5387527 - 5388171 | 24858.1 |
| cp4-44 prophage | SAMEA3485113_05361 | Not Available | Negative | 5388190 - 5388411 | 8411.2 |
| restriction endonuclease | SAMEA3485113_05362 | Not Available | Positive | 5388630 - 5389307 | 25297.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





