Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | SAMEA3485113_05322 | Not Available | Negative | 5354998 - 5356527 | 56361.6 |
| chaperonin groel | SAMEA3485113_05323 | Not Available | Negative | 5356716 - 5358353 | 57209.0 |
| 10 kda chaperonin (protein cpn10) (groes protein) | SAMEA3485113_05324 | Not Available | Negative | 5358409 - 5358801 | 14019.1 |
| aac3-vi | SAMEA3485113_05325 | Not Available | Negative | 5358936 - 5359838 | 32141.1 |
| aminoglycoside adenylyltransferase | SAMEA3485113_05326 | Not Available | Negative | 5360002 - 5360793 | 29082.7 |
| class 1 integron integrase protein inti1 | SAMEA3485113_05327 | Not Available | Positive | 5360920 - 5361933 | 38383.4 |
| recombinase | SAMEA3485113_05328 | Not Available | Positive | 5362239 - 5362796 | 21221.6 |
| transposase | SAMEA3485113_05329 | Not Available | Positive | 5362799 - 5365771 | 111065.0 |
| uncharacterised protein | SAMEA3485113_05331 | Not Available | Positive | 5367246 - 5368112 | 34198.8 |
| uncharacterised protein | SAMEA3485113_05332 | Not Available | Negative | 5368109 - 5369062 | 37058.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





