Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-galactosidase | SAMEA3485113_05312 | Not Available | Positive | 5343177 - 5345303 | 80621.9 |
| raffinose permease rafb | SAMEA3485113_05313 | Not Available | Positive | 5345358 - 5346635 | 46522.9 |
| raffinose invertase | SAMEA3485113_05314 | Not Available | Positive | 5346632 - 5348062 | 53855.5 |
| glucose-specific pts system eiia component | SAMEA3485113_05315 | Not Available | Positive | 5348126 - 5348641 | 18068.8 |
| aminoimidazole riboside kinase | SAMEA3485113_05316 | Not Available | Positive | 5349253 - 5350179 | 32805.4 |
| sucrose porin | SAMEA3485113_05317 | Not Available | Positive | 5350279 - 5351775 | 54495.4 |
| is1414, transposase | SAMEA3485113_05318 | Not Available | Negative | 5352012 - 5352548 | 20707.1 |
| putative integrase | SAMEA3485113_05319 | Not Available | Negative | 5352580 - 5353386 | 31273.1 |
| truncated transposase | SAMEA3485113_05320 | Not Available | Negative | 5353592 - 5353777 | 6983.27 |
| uncharacterised protein | SAMEA3485113_05321 | Not Available | Positive | 5353946 - 5354779 | 29496.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





