Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2,5-diketo-d-gluconic acid reductase b | SAMEA3485113_05265 | Not Available | Negative | 5288711 - 5289514 | 29427.5 |
| Trna-asp | Not Available | Not Available | Positive | 5289677 - 5289753 | Not Available |
| transposase | SAMEA3485113_05269 | Not Available | Positive | 5292396 - 5292581 | 6882.28 |
| issfl3 orfc | SAMEA3485113_05270 | Not Available | Positive | 5292691 - 5292870 | 6888.26 |
| proline/glycine betaine transporter | SAMEA3485113_05271 | Not Available | Negative | 5293403 - 5294695 | 46868.8 |
| l-lactate permease | SAMEA3485113_05272 | Not Available | Negative | 5294871 - 5296514 | 58879.0 |
| major pilu subunit operon regulatory protein papb | SAMEA3485113_05273 | Not Available | Positive | 5297396 - 5297686 | 10772.0 |
| l-lactate dehydrogenase | SAMEA3485113_05274 | Not Available | Negative | 5297763 - 5298929 | 42038.6 |
| tyrosine transporter | SAMEA3485113_05275 | Not Available | Negative | 5299489 - 5300733 | 44390.6 |
| 4-aminobutyrate aminotransferase | SAMEA3485113_05276 | Not Available | Negative | 5300868 - 5302133 | 44945.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





