Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | SAMEA3485113_05178 | Not Available | Positive | 5215962 - 5216090 | 4852.16 |
| uncharacterised protein | SAMEA3485113_05179 | Not Available | Positive | 5216087 - 5216293 | 7505.61 |
| conjugative transfer protein | SAMEA3485113_05180 | Not Available | Positive | 5216555 - 5216836 | 10718.2 |
| conjugative transfer protein | SAMEA3485113_05181 | Not Available | Positive | 5216823 - 5217377 | 20254.6 |
| conjugal transfer protein trbj | SAMEA3485113_05182 | Not Available | Positive | 5217367 - 5217681 | 11458.1 |
| conjugal transfer protein trbf | SAMEA3485113_05183 | Not Available | Positive | 5217635 - 5218027 | 15441.2 |
| conjugal transfer pilus assembly protein trah | SAMEA3485113_05184 | Not Available | Positive | 5218014 - 5219387 | 50250.1 |
| conjugative transfer protein | SAMEA3485113_05185 | Not Available | Positive | 5219384 - 5222206 | 102645.0 |
| surface exclusion inner membrane protein tras | SAMEA3485113_05186 | Not Available | Positive | 5222227 - 5222724 | 19100.0 |
| conjugal transfer surface exclusion protein trat | SAMEA3485113_05187 | Not Available | Positive | 5222711 - 5223487 | 27506.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





