Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna gyrase inhibitory protein | SAMEA3485113_05070 | Not Available | Positive | 5128880 - 5129353 | 18076.3 |
| inner membrane protein yeea | SAMEA3485113_05071 | Not Available | Positive | 5129551 - 5130198 | 23979.2 |
| uncharacterised protein | SAMEA3485113_05075 | Not Available | Positive | 5131730 - 5131894 | 6190.63 |
| uncharacterised protein | SAMEA3485113_05102 | Not Available | Positive | 5146464 - 5147006 | 20478.5 |
| frv operon regulatory protein | SAMEA3485113_05105 | Not Available | Positive | 5147247 - 5148443 | 44789.3 |
| putative lipoprotein | SAMEA3485113_05106 | Not Available | Negative | 5148493 - 5149173 | 26036.8 |
| formate dehydrogenase accessory protein | SAMEA3485113_05107 | Not Available | Negative | 5149223 - 5150056 | 30533.8 |
| formate dehydrogenase-o | SAMEA3485113_05109 | Not Available | Positive | 5153313 - 5154215 | 33102.1 |
| formate dehydrogenase, cytochrome b556(fdo) subunit | SAMEA3485113_05110 | Not Available | Positive | 5154212 - 5154847 | 24607.7 |
| putative formate dehydrogenase formation protein | SAMEA3485113_05111 | Not Available | Positive | 5154844 - 5155773 | 34690.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





