Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp phosphoribosyltransferase | SAMEA3485113_05058 | Not Available | Negative | 5119051 - 5119950 | 33354.8 |
| antitoxin yefm | SAMEA3485113_05060 | Not Available | Positive | 5120429 - 5120680 | 9308.13 |
| toxin | SAMEA3485113_05061 | Not Available | Positive | 5120677 - 5120931 | 10216.1 |
| protein yeez | SAMEA3485113_05062 | Not Available | Positive | 5121014 - 5121838 | 29681.7 |
| lysr family transcriptional regulator | SAMEA3485113_05063 | Not Available | Positive | 5121863 - 5122813 | 34902.9 |
| putative amino acid permease | SAMEA3485113_05065 | Not Available | Positive | 5123080 - 5124438 | 49540.5 |
| inner membrane protein | SAMEA3485113_05066 | Not Available | Positive | 5124671 - 5125675 | 36218.2 |
| sira family protein | SAMEA3485113_05067 | Not Available | Positive | 5125689 - 5125916 | 8092.61 |
| exodeoxyribonuclease i | SAMEA3485113_05068 | Not Available | Negative | 5125959 - 5127386 | 54428.6 |
| penicillin-binding protein 6b | SAMEA3485113_05069 | Not Available | Positive | 5127595 - 5128761 | 43304.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





